Open-Source-Software-Entwicklung und Downloads

BBMap

We call for your help with the Japanese translations for project summaries. The submitted translations will be posted after simple evaluation. (Not only the translation itself is going to be checked, but we also make sure it's clear of wiki format problems. Especially problems that are related to the layout, such as line breaks and links, will be checked, so please give heed. When there appears to be a problem with the translation itself or the layout, we may not be able to post your translation. We often see problematic cases related to links. When there's going to be a line of Japanese text right after the URL, please make sure to leave a space to separate.) Also, even with projects that may already have their summaries translated, if you find an outdated translation or typographical errors, please update. Login to start translating. When you are done, you will find your name at the bottom of the summary as the translator.

You are not Logged in. If you submit this translation, your name will not show on the this project page (will be logged as "translated by an anonymous user").

Projektbeschreibung:

English:
(Letztes Update 2014-07-30 13:00)

This package includes BBMap, a short read aligner, as well as various other bioinformatic tools. It is written in pure Java, can run on any platform, and has no dependencies other than Java being installed (compiled for Java 6 and 7). All tools are efficient and multithreaded.

BBMap: Short read aligner for DNA and RNA-seq data. Capable of handling arbitrarily large genomes with millions of scaffolds. Handles Illumina, PacBio, 454, and other reads; very high sensitivity and tolerant of errors and numerous large indels. Very fast.

BBNorm: Kmer-based error-correction and normalization tool.

Dedupe: Simplifies assemblies by removing duplicate or contained subsequences that share a target percent identity.

Reformat: Reformats reads between fasta/fastq/scarf/fasta+qual/sam, interleaved/paired, and ASCII-33/64, at over 500 MB/s.

BBDuk: Filters or trims reads with kmer matches to an artifact/contaminant file.

...and more!

No Japanese Translated Data
Japanese:
 
Über OSDN
Software suchen
Entwickeln Software
Hilfeseiten